Regularized multivariate functional Principal Component Analysis (ReMFPCA)

1. "Regularized multivariate functional Principal Component Analysis", Under Revision
2. Package on GitHub and CRAN

Functional Singular Spectrum Analysis (FSSA) and
Multivariate Functional Singular Spectrum Analysis (MFSSA)

1. "Rfssa: An R Package for functional singular spectrum analysis", The R Journal, Accepted, (2024)
2. "Functional time series forecasting: Functional singular spectrum analysis approaches", Stat, Vol. 12, e621, (2023)
3. "Multivariate functional Singular Spectrum Analysis: A nonparametric approach for analyzing multivariate functional time series", a book chapter in Springer, ISSN: 2524-7735, 187-221, (2022)
4. "Functional singular spectrum analysis", Stat (Special Issue in Statistics and Data Science), Vol. 10, e330, (2021)
5. Package on GitHub and CRAN

Nonparametric Collective Spectral Density Estimation (NCSDE) and Multivariate NCSDE (MNCSDE)

1. "Collective spectral density estimation and clustering for spatially-correlated data", Spatial Statistics, Vol. 38, 100451, (2020)
2. "Nonparametric collective spectral density estimation with an application to clustering the brain signals", Statistics in Medicine, Vol. 37(30), 4789-4806, (2018)
3. Package on GitHub

Genome-Wide Identity-by-Descent (GWID)

1. "GWID: A new Genome-Wide identity-by-descent visualization and analysis tool for disease gene mapping", To be submitted to Bioinformatics
2. Package on GitHub

Penelized Spline Collective Density Estimation (PSCDE)

1. "Protein structure classification and loop modeling using multiple Ramachandran distributions", Computational and Structural Biotechnology, Vol. 15, 243-254 (2017)
2. "Collective estimation of multiple bivariate density functions with application to angular-sampling-based protein loop modeling", Journal of the American Statistical Association, Vol. 111, No. 513, 43-56, (2016)

Skewed Empirical Bayesian (SEB) approach in multiple hyp. test

1. "Empirical Bayesian approach to testing multiple hypotheses with separate priors for left and right alternatives", Statistical Applications in Genetics and Molecular Biology, Vol.17(4), A20180002, (2018)
2. "Testing multiple hypotheses with skewed alternatives", Biometrics, Vol. 72, No. 2, 494-502, (2016)

Transformed Functional PCA (FPCA.t) (FDA-FPCA)

1. "Integrating data transformation in principal components analysis", Journal of Computational and Graphical Statistics, Vol.24, No.1, 84-103, (2015)

LagSVD

1. "Assessing protein conformational sampling methods based on bivariate lag-distributions of backbone angles", Brief. in Bioinformatics, Vol.14(6), 724-736, (2013)